Practical benefits of EC: building a comprehensive exposure story

Similar documents
PRACTICAL BENEFITS OF EC: BUILDING A COMPREHENSIVE EXPOSURE STORY. Presented by Donald Benoot, SGS Life Sciences Zegher Vereecke, SGS Life Sciences

BUILDING A COMPREHENSIVE. Presented dby Donald ldbenoot, SGS Life Sciences Si

Mixed Effects Models Yan Wang, Bristol-Myers Squibb, Wallingford, CT

CDISC Standards Problems and Solutions: Some Examples. Paul Terrill and Sarah Brittain

Problem Points Score USE YOUR TIME WISELY USE CLOSEST DF AVAILABLE IN TABLE SHOW YOUR WORK TO RECEIVE PARTIAL CREDIT

ILDA Image Data Transfer Format

STAT 113: Statistics and Society Ellen Gundlach, Purdue University. (Chapters refer to Moore and Notz, Statistics: Concepts and Controversies, 8e)

specifications of your design. Generally, this component will be customized to meet the specific look of the broadcaster.

AIM INTRODUCTION SIMPLIFIED WORKFLOW

Linear mixed models and when implied assumptions not appropriate

Comparison of Mixed-Effects Model, Pattern-Mixture Model, and Selection Model in Estimating Treatment Effect Using PRO Data in Clinical Trials

EE201: Transmission Line Protection

JOURNAL OF PHARMACEUTICAL RESEARCH AND EDUCATION AUTHOR GUIDELINES

Switching Solutions for Multi-Channel High Speed Serial Port Testing

Synergy SIS Attendance Administrator Guide

CITY OF LOS ANGELES CIVIL SERVICE COMMISSION CLASS SPECIFICATION POSTED JUNE VIDEO TECHNICIAN, 6145

About... D 3 Technology TM.

ITU-T Y.4552/Y.2078 (02/2016) Application support models of the Internet of things

Digital Aquatics Reef Keeper Setup Guide (for Shlobster dosing pumps dosing 2 part)

ILDA Image Data Transfer Format

Guide to contributors. 1. Aims and Scope

RADview-PC/TDM. Network Management System for TDM Applications Megaplex RAD Data Communications Publication No.

SIDRA INTERSECTION 8.0 UPDATE HISTORY

User Guide for the Early Countermeasure Model EmerSim of RODOS PRTY 6.0L

FOR IMMEDIATE RELEASE. Frequently Asked Questions (FAQs) The following Q&A was prepared by Posit Science. 1. What is Tinnitus?

How to write an article for a Journal? 1

Evaluating Oscilloscope Mask Testing for Six Sigma Quality Standards

Master of Arts in Leadership: Modern Music. Master of Arts in Leadership: Music Production

%CHCKFRQS A Macro Application for Generating Frequencies for QC and Simple Reports

3 PARAGRAPHS CAN HAVE THEIR LAYOUT LIKE THIS OR START UNINDENTED WITH A SEPARATING ONE LINE SKIPPED TO GIVE FREE SPACE IN BETWEEN TWO PARAGRAPHS

Telecommunication Development Sector

The Propeller Based Internet Logging Pill Dispenser, a micromedic 2013 Submission

Summary of. DMC Meetings How to avoid common traps? Giacomo Mordenti Global Biometrics Head, Livanova

Analysis of WFS Measurements from first half of 2004

Short scientific report STSM at the Tinnitus Center in Rome (Italy)

Incorporation of Escorting Children to School in Individual Daily Activity Patterns of the Household Members

COMPOUNDING SYSTEMS FOR PROFESSIONALS


INSTRUCTIONS FOR AUTHORS

Mixed Models Lecture Notes By Dr. Hanford page 151 More Statistics& SAS Tutorial at Type 3 Tests of Fixed Effects

WESTERN ELECTRICITY COORDINATING COUNCIL. WECC Interchange Tool Overview

Overview. Project Shutdown Schedule

Centre for Economic Policy Research

International Journal of Information Science and Management (IJISM)

Iterative Direct DPD White Paper

First Encounters with the ProfiTap-1G

FEASIBILITY STUDY OF USING EFLAWS ON QUALIFICATION OF NUCLEAR SPENT FUEL DISPOSAL CANISTER INSPECTION

BER MEASUREMENT IN THE NOISY CHANNEL

APA Style, 6th Edition Summary Guide. General Formatting. Title Page Elements

Erasing 9840 and 9940 tapes

properly formatted. Describes the variables under study and the method to be used.

21. OVERVIEW: ANCILLARY STUDY PROPOSALS, SECONDARY DATA ANALYSIS

BIC Standard Subject Categories an Overview November 2010

Gluten-Free Certification Program (GFCP) Trademark Usage Guide

It s Not Working! Who Do I Call? Now What Do I Do? Stacy Pitsch, BSN, RNC-nic Phillip Martin, AR SAVES Video Support

E6(R2) Good Clinical Practice

Guidelines for Assuring Softcopy Image Quality

NOTEBOOKS. C. General Guidelines for Maintaining the Lab Notebook

PEP-I1 RF Feedback System Simulation

ITU-T Y Specific requirements and capabilities of the Internet of things for big data

Incorrect Temperature Measurements: The Importance of Transmissivity and IR Viewing Windows

Instructions to Authors

SWITCHED INFINITY: SUPPORTING AN INFINITE HD LINEUP WITH SDV

The Official Journal of ASPIRE Fertility & Reproduction. Instructions to Authors (offline submission)

VISION. Instructions to Authors PAN-AMERICA 23 GENERAL INSTRUCTIONS FOR ONLINE SUBMISSIONS DOWNLOADABLE FORMS FOR AUTHORS

QT Measurements on-screen Methods

Regression Model for Politeness Estimation Trained on Examples

Composer Style Attribution

6.3 Sequential Circuits (plus a few Combinational)

Start of DTV Transition 600 MHz repacking

Physics Lab 2 RLC Circuit Oscilloscope & Function Generator

ISO Digital Forensics- Video Analysis

Just the Key Points, Please

VISUAL BRAND IDENTITY GUIDELINES

Congratulations to the Bureau of Labor Statistics for Creating an Excellent Graph By Jeffrey A. Shaffer 12/16/2011

Experiment 7: Bit Error Rate (BER) Measurement in the Noisy Channel

Application Note AN-708 Vibration Measurements with the Vibration Synchronization Module

FLUX-CiM: Flexible Unsupervised Extraction of Citation Metadata

PRELIMINARY. QuickLogic s Visual Enhancement Engine (VEE) and Display Power Optimizer (DPO) Android Hardware and Software Integration Guide

Analyze Frequency Response (Bode Plots) with R&S Oscilloscopes Application Note

Vascular. Development of Trinias FPD-Equipped Angiography System. 1. Introduction. MEDICAL NOW No.73 (2013.2) Yoshiaki Miura

Case study: how to create a 3D potential scan Nyquist plot?

Concept of ELFi Educational program. Android + LEGO

Auro 11.1 update for ICMP. Installation manual

Math Released Item Grade 5. Whole Number and Fraction Part 0542-M02399

Design and Use of a DTV Monitoring System consisting of DVQ(M), DVMD/DVRM and DVRG

CPU Bach: An Automatic Chorale Harmonization System

Easy access to medical literature: Are user habits changing? Is this a threat to the quality of Science?

HIGH SPEED ASYNCHRONOUS DATA MULTIPLEXER/ DEMULTIPLEXER FOR HIGH DENSITY DIGITAL RECORDERS

Music therapy in mental health care

FLIP-FLOPS AND RELATED DEVICES

CHM 110 / Guide to laboratory notebooks (r10) 1/5

21. OVERVIEW: ANCILLARY STUDY PROPOSALS, SECONDARY DATA ANALYSIS

The Impact of Media Censorship: Evidence from a Field Experiment in China

Modeling Digital Systems with Verilog

R&S BCDRIVE R&S ETC-K930 Broadcast Drive Test Manual

ISO INTERNATIONAL STANDARD. Bibliographic references and source identifiers for terminology work

REQUIREMENTS FOR MASTER OF SCIENCE DEGREE IN APPLIED PSYCHOLOGY CLINICAL/COUNSELING PSYCHOLOGY

Countable Controlled Substance Book

Fiber Optic Testing. The FOA Reference for Fiber Optics Fiber Optic Testing. Rev. 1/31/17 Page 1 of 12

Transcription:

Paper SI02 Practical benefits of : building a comprehensive exposure story Donald Benoot, SGS Life Sciences, Mechelen, Belgium ABSTRACT Since the inclusion of in SDTM, exposure data can be entered in the database as it is collected in the e- source/(e)crf. enables us to document an accurate, traceable and clearly structured exposure story in situations where the exposure data and its provenance would otherwise be unclear and ambiguous. The derived EX can be kept clear and concise, aimed at analysis. These real-life case studies are discussed: Capturing relevant exposure information without cluttering EX/SUPPEX. Factual data entry by site personnel (crucial when using e-source). Unblinding in an orderly fashion. Per dose traceability. Multiple dose medications. Complex dosing schemes. Using MOOD to document scheduled and performed exposures. Our shared experience with using to document the exposure in a comprehensive manner can help others to use to accurately and clearly capture the whole story behind trial exposures in very diverse situations. INTRODUCTION The Exposure domain model (EX) records the details of a subject's exposure to protocol-specified study treatment. As EX is ultimately used for the statistical analysis, it should be concise and easily analyzable. However, if EX is the only exposure capturing domain, it can become too cluttered (by adding too much detail) or miss essential information (by making it too concise). Evidently, we don't want EX to be the only exposure capturing domain. To facilitate the accurate capturing of the exposure data, the Domain was introduced. Since the inclusion of in SDTM, as of SDTM IG 3.2, exposure data can be collected as it is present in the esource or the (e)crf. The EX dataset is derived afterwards from the dataset and other relevant data sources (like for example from the randomization data, medication logs...). At SGS Life Sciences, we have implemented since it was included in the SDTM standard. The usage of enabled us to document an accurate, traceable, and clearly structured exposure story in situations where the exposure data and its provenance would otherwise have been unclear and ambiguous CASE STUDIES To illustrate how can help in creating an accurate, traceable and clearly structured exposure story, the following real-life case studies are discussed: Unblinding in an orderly fashion. Capturing relevant exposure information without cluttering EX/SUPPEX. Factual data entry by site personnel (crucial when using e-source). Per dose traceability. Multiple dose medications. Complex dosing schemes. Using MOOD to document scheduled and performed exposures UNBLINDING IN AN ORDERLY FASHION One of the obvious advantages of using is the unblinding in an orderly fashion. 1

In the blinded dataset, the exposure term (TRT) is a general placeholder. All Data Management activities are performed on the blinded dataset. Once the data is unblinded, we can derive EX, based on the dataset and the information in the randomization log. remains untouched at the time of unblinding. The derivations of EX is tested during the quality control phase of the setup of the database using dummy data and dummy unblinding data. In the derived dataset EX, EXTRT is updated from TRT to contain the actual treatment. The actual dose is also recalculated based on the placebo/active ingredient status. The usage of ensures a stable dataset and a tested derivation of EX. Without, updates would be necessary to the actual data-capturing EX domain at unblinding; a crucial time at which data stability is a definite requirement. Example 1: Placebo-controlled trial TRT DOSE DOSU EXTRT EXDOSE EXDOSU TRT 150 mg TRT 150 mg TRT 150 mg PLACEBO 0 mg Table 1: Placebo-controlled trial. TRT is a general term. DOSE contains the theoretical dose. After unblinding, EX is derived. EXTRT is specified correctly and EXDOSE is recalculated. As you can see in the datasets, the dataset contains a general placeholder TRT and the theoretical dose. After unblinding, the EX dataset is derived from the datasets and the unblinding information. EXTRT is specified correctly and the dose is recalculated Example 2: Double dummy trial TRT DOSE DOSU EXTRT EXDOSE EXDOSU 1 TABLET TRT A 150 mg 1 TABLET PLACEBO 0 mg 1 TABLET TRT B 250 mg Table 2: Double dummy trial. TRT, DOSE and DOSU are general terms. After unblinding, EX is derived. EXTRT is specified correctly and EXDOSE and EXDOSU are recalculated as required, taking the different treatments, dosages and placebo into account. In a double dummy trial, the subject is exposed to either one of two treatments or to the placebo. Once again, the TRT is a general placeholder showing all the possible exposures. The dose is shown as a general placeholder as well. For double dummy trials, both the subject and the site personnel usually need to remain blinded, so the drugs and the placebos are provided in an identical formulation (e.g. the same tablet shape, color...). Here an extra derivation has to be performed to get the correct dosing information in the EX dataset. The extra information for derivation is documented in the protocol or the randomization log, and if wanted could be recorded in the database as well; e.g. in SUPP. CAPTURING RELEVANT EXPOSURE INFORMATION can also be used to capture relevant exposure information without cluttering up EX and/or SUPPEX. This can even be interesting for open label trials. The information captured in can document why the concentration in EX is not as expected, or it can document errors in exposure which might not be visible in EX. Example 1: Dosing inconsistency for an IV exposure USUBJI D EXTRT EXDOS E EXDOS U USUBJI D TRT DOS E DOS U PST RG PST RGU 1001 TRT 150 mg 1001 TRT 100 ml 1.50 mg/ml 1002 TRT 147 mg 1002 TRT 98 ml 1.50 mg/ml Table 3: Identifying the origin of a dosing inconsistency by using. In this example, the origin of the calculated EXDOSE discrepancy for subject 1002 can be traced back to an incorrect volume administered, rather than an incorrect solution concentration. Be aware that the domain is on the right side in this table. The amount of drug in the body due to IV exposure is dependent on the volume administered and the concentration of the solution. In case of aberrations from the expected dose of 150 mg, as seen in the example shown in Table 3, EX only provides the end result information (i.e. 147 mg). It is not clear from EX whether the error occurred during the preparation of the solution (i.e. a solution with an incorrect concentration), or if the total volume of 100 ml was not provided correctly. In this example, the origin of the calculated EXDOSE discrepancy for subject 1002 can be traced back to an incorrect volume administered, rather than an incorrect solution concentration. 2

By using, specifically the DOSE/DOSU information combined with the Pharmaceutical Strength (PSTRG) information, we can document in the domain why the resulting amount of medication was not as expected per protocol. PSTRG and PSTRGU are parameters which indicate the amount of an active ingredient expressed quantitatively per dosage unit, volume, or weight. Example 2: Documenting errors in exposure for weight-dependent exposures USUBJID EXTRT EXDOSE EXDOSU USUBJID TRT DOSE DOSU 1001 TRT 15.8800 mg 1001 TRT 0.2 mg/kg 1002 TRT 15.0400 mg 1002 TRT 0.2 mg/kg 1003 TRT 15.1632 mg 1003 TRT 0.2016 mg/kg Table 4: Identifying incorrect dose per weight by using. In this example, the concentrations documented in EX look perfectly acceptable. However, the information in identifies an incorrect dose/kg for subject 1003. Be aware that the domain is on the right side in this table. Table 4 shows that the 3 subjects received a dose based on their weight. It is impossible to clean the dose information without knowledge of the expected dose per kilogram, the weight of the subject, and, to facilitate the cleaning process, the calculated actual dose per kilogram. In the table, we can now see that, although everything looked acceptable in the EX dataset, the actual dose per kg for subject 1003 was incorrect. FACTUAL DATA ENTRY TRT DOSE DOSU EXTRT EXDOSE EXDOSU TRT 1 SYRINGE TRT 150 mg TRT 1 SYRINGE PLACEBO 0 mg Table 5: Factual recording of a blinded syringe exposure and unblinded EX. is entered factually correct without making unknown assumptions. EX is then derived based on additional information (in this case the randomization list and the apothecary medication log). This is especially important when working with an esource system on site, because no processing of exposure information can be done in between the source data and the CRF. The site personnel cannot enter exposure data in the system of which they do not have accurate knowledge. The exposure data is entered as performed on site, without making assumptions on the type and the concentration of the medication. The example in Table 5 shows a trial where the subjects were exposed with a solution given orally using a syringe. The color of the solution would have been unblinding, so the syringes themselves were blinded using dark tape. Because of this, the nurses could not ascertain the volume given. As you can see, the treatment information on dosing (DOSE/DOSU) collected in the dataset was 1 SYRINGE. To be able to derive the EX datasets, specific data was gathered from the randomization list (active vs placebo) and the apothecary medication log (dose and concentration). Joining this information together enabled us to derive EX while keeping valid, accurate and factual. PER DOSE TRACEABILITY USUBJID TRT DOSE DOSU PSTRG PSTRGU SUPP.QNAM SUPP.QVAL 1001 TRT A 1 TABLET 100 mg/tablet CODE AABB01 1001 TRT A 1 TABLET 100 mg/tablet CODE AABB02 1001 TRT A 1 TABLET 100 mg/tablet CODE AABB03 USUBJID EXTRT EXDOSE EXDOSU 1001 TRT A 300 mg Table 6: Per dose traceability. Dose codes are traced in, but total dose is recalculated in EX. For some trials, the individual tables or capsules are coded and this information should remain present in the database. However, this information is often not important for the actual analysis. The example in the table above, shows a situation where a subject was given 3 coded tablets at a single visit. In the three records are present, together with a custom SUPP link to the code of the tablet. In this case, the codes were not necessary in the analysis of the data and were therefore not expected in EX. Because of this, we could join the records together and present the EX data in a concise and easily analyzable EX dataset. 3

MULTIPLE DOSE MEDICATIONS USUBJID TRT DOSE DOSU PSTRG PSTRGU 1001 TRT A 1 TABLET 25 mg/tablet 1001 TRT A 1 TABLET 50 mg/tablet 1001 TRT A 2 TABLET 100 mg/tablet USUBJID EXTRT EXDOSE EXDOSU 1001 TRT A 275 mg Table 7: Multiple dose medications. Exposures with different dosages can be entered in as separate entries, but are combined in EX to facilitate the analysis. In Single Ascending Dose (SAD) and Multiple Ascending Dose (MAD) trials different dosages need to be prepared. To simplify the manufacturing process, the doses can be prepared by combining tablets with different concentrations. Exposures with different dosages can be entered in as separate entries and combined in EX as a single entry, to facilitate the analysis. COMPLEX DOSING SCHEMES TRT DOSE DOSU VISIT EXTRT EXSCAT EXDOSE EXDOSU VISIT DEVICE 1 2 INHALATION VISIT3 COMPOUND 1 DEVICE 1 200 mg VISIT3 DEVICE 2 6 INHALATION VISIT3 COMPOUND 2 DEVICE 1 20 mg VISIT3 DEVICE 1 2 INHALATION VISIT4 PLACEBO DEVICE 2 0 mg VISIT3 DEVICE 2 6 INHALATION VISIT4 COMPOUND 1 DEVICE 1 200 mg VISIT4 COMPOUND 2 DEVICE 1 20 mg VISIT4 COMPOUND 1 DEVICE 2 600 mg VISIT4 COMPOUND 2 DEVICE 2 60 mg VISIT4 Table 8: Complex dosing scheme. Two types of inhalation devices are used. The exposure is recorded in (left) as inhalations. Each inhalation contains 2 active compounds or a placebo. The active compounds are a compound (COMPOUND 1) with a dose of 100 mg/inhalation and a compound (COMPOUND 2) with a dose of 10 mg/inhalation. EX is derived per device, on sponsor request. Using facilitates complex dosing schemes by enhancing the traceability between the recorded dosing in and the derived value in EX. For example, in trials where a combination of multiple active and placebo exposures are performed within the same exposure time point, we can establish an easily traceable link between the performed exposure, the randomization data and the derived data. In the example above (Table 8), two types of inhalation devices are used. The exposure is recorded in (left) as inhalations. Each inhalation contains 2 active compounds or a placebo. The active compounds are a compound (COMPOUND 1) with a dose of 100 mg/inhalation and a compound (COMPOUND 2) with a dose of 10 mg/inhalation. EX is derived per device, as requested by the sponsor. We can see in EX how the inhalations are derived to the correct mg per compound per visit and per device. The unblinding is incorporated as well, differentiating between the active and placebo devices. The actual dose is also recalculated in EX based on the amount of inhalations. TRT DOSE DOSU VISIT EXTRT EXDOSE EXDOSU VISIT DEVICE 1 2 INHALATION VISIT3 COMPOUND 1 200 mg VISIT3 DEVICE 2 6 INHALATION VISIT3 COMPOUND 2 20 mg VISIT3 DEVICE 1 2 INHALATION VISIT4 COMPOUND 1 800 mg VISIT4 DEVICE 2 6 INHALATION VISIT4 COMPOUND 2 80 mg VISIT4 Table 9: Alternative derivation of the used in Table 8 under the assumption device information is not important for the analysis. The example above (Table 9) present a different derivation for the situation presented in Table 8. In this example, the device information is assumed to be irrelevant for the analysis and thus is dropped. We know from the 4

randomization list and the medication log that DEVICE 2 on VISIT 3 contains placebo. All other inhalations contain the active compounds. Deriving EX now gives a very concise overview of compounds 1 and 2 for each visit. USING MOOD TO DOCUMENT SCHEDULED AND PERFORMED EXPOSURES TRT MOOD DOSE DOSU PRESP OCCUR VISIT TRT A SCHEDULED 50 mg 1 TRT A PERFORMED 50 mg Y Y 1 TRT A SCHEDULED 100 mg 2 TRT A PERFORMED 100 mg Y Y 2 TRT A SCHEDULED 200 mg 3 TRT A PERFORMED Y N 3 EXTRT EXDOSE EXDOSU VISIT TRT A 50 mg 1 TRT A 100 2 Table 10: MOOD can be used to document both the scheduled and the performed exposures in. When deriving EX, only the performed records for which the occurrence is marked as Yes in will create a record in EX. The MOOD parameter contains the mode or condition of the record specifying whether the intervention (activity) is intended to happen or has happened. PRESP defines whether an exposure is prespecified in the esource/(e)crf; and the OCCUR then records whether or not a prespecified records occurred. In the example above (Table 10), three scheduled exposures are listed, giving a clear overview of which exposures we would expect at those visits. The exposures that should be performed are present as prespecified records in which the dose and the occurrence are recorded. The first two exposures occur, the third does not. When deriving EX, only the occurred exposures and the actual dose are listed; once again creating a dataset which is easy to analyze. Even though EX is concise, all planned and actual exposure information is present in. CONCLUSION The usage of enables us to document an accurate, traceable, and clearly structured exposure story in situations where the exposure data and its provenance would otherwise have been unclear and ambiguous. In sharing our experience using to document the exposure in a comprehensive manner, we hope we can help other users to implement and use to accurately and clearly capture the whole story behind trial exposures in very diverse situations. CONTACT INFORMATION Your comments and questions are valued and encouraged. Contact the author at: Donald Benoot SGS Generaal de Wittelaan 19A Mechelen / B-2800 Work Phone: +32 (0) 473 94 32 60 Fax: +32(0)15 29 93 02 Email: donald.benoot@sgs.com Brand and product names are trademarks of their respective companies. 5